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Original experimental research figures

Interpretation and provenance

These are original source-verified research SVG assets; the earlier figures were copied from their named draft branches and the newer long-chain plot was constructed from the original retained scientific case results, not generic stock illustrations. They visualize simulation evidence, not results from human-subject recordings. Their presence here does not make the underlying experimental methods available in the stable 1.1.0 installation.

Sparse-group inference F1

F1 true-null and fixed-effect simulation results from 6,000 actual sparse PACE fits

Independent fitted F1 null/power study · Source run #37977625803

Bayesian B6/B7

B6 B7 collapsed Gibbs mixing evidence

Exact partially collapsed population-mean experiment

Comparison of covariance R-hat and ESS from 36 actual native Bayesian posterior fits

Negative joint-loading sampler experiment · Original source #38000101053

Longer-chain independent covariance reference: nine source fits

Nine original fitting results comparing B6 and B7 Gibbs, elliptical-slice and independent NUTS identified covariance diagnostics

Full original-source study, B6/B7 results and limitations · Original workflow #38039822342 · Original artifacts: 11665746776, 11665707552, 11665607799.

This added scientific SVG is source-accurately constructed from the nine original fitted case results; it is not an independently collected dataset and does not establish posterior coverage.

Four-chain independent reference, two fresh datasets per rank-one design

Minimum identified population bulk ESS and worst R-hat from six source-verified four-chain NUTS posterior fits

Six-fit source results, full provenance and unqualified inference limits · Original workflow #38047872726.

All six four-chain fits passed the exploratory mixing diagnostics; this is not evidence of 90% interval coverage or rank-two validity. The plot depicts one rank-one fit per replicate (six independently generated datasets), not independent posterior interval calibration.

Rank-two actual PyMC log posterior and automatic-gradient contract (R2)

Original four-condition PyMC rank-two maximum scaled AD gradient discrepancies against independently evaluated numerical derivatives

Source-verified mathematical comparisons and four artifact identifiers · Original scientific workflow #38095088126.

This is an original plot of the four actual source-run numerical derivative comparisons. It is not a completed rank-two NUTS fit, inference validation, or an independent human eye-tracking study.

B6 SBC R2: same-data computational-screen rescue, not new calibration data

Identical generated B6 replicate refitted with full sampling budget: source-grounded R-hat and ESS comparison

Source B6 longer-budget refit and unchanged stage-zero failure · Original workflow #38095220518.

The same prior-generated replicate is used twice. Do not count the longer refit as another independent SBC dataset or interpret its 90% interval inclusion as repeated coverage.

Rank-two NUTS R3: first real posterior computation on paired and asynchronous designs

Original rank-two NUTS computational diagnostics: paired pass and asynchronous mean-functionals failures

Rank-two paired-versus-asynchronous pilot and numerical failure localization · Original scientific workflow #38096271285.

Both fits completed; all six population-mean functionals in the asynchronous dataset failed an exploratory screen, while its nine covariance functionals passed. One dataset per design cannot establish a general asynchronous-data effect or interval calibration.

Rank-one prior-SBC pilot: original four-dataset midpoint ranks

Original B6 rank-one truth ranks and screening R-hat for four prior-generated datasets

Four-dataset SBC stage-0 report, original ranks and diagnostic failure · Source workflow #38087405506.

The four datasets are insufficient for rank-uniformity or interval-coverage claims. One completed posterior fit failed the exploratory computational convergence screen; that failure is explicitly shown. The rank-two mathematical validation is presented as a source-audited numerical contract, without an invented discrepancy plot because exact case-level differences must be read from the retained source artifacts.

F5 change-point null behavior

F5 original dependence-aware AR1 research null rejection evidence

External-baseline dependence testing

F5 independent-baseline unknown phi null rejection figure

Unknown-AR(1) external-baseline study

Observed AR1 and AR2 true-null rejection under iid, AR1, AR2, MA1 and nonstationarity generators

AR(2) / MA(1) / nonstationary falsification · Source run #38000177988

W3 original known-truth functional regression validation

Source-ledger verified functional regression RMSE across 24 independent simulation blocks

Original W3 source-audited results, exploratory target, and study limits · Scientific workflow #38173426113 (source artifact 11715355738).

All 48 workflow fits completed across 24 generating seed blocks. The plotted values are original case-level recovery RMSE, not empirical eye-tracking recordings. Curve- and participant-level inference units have different simulated dependence structures; exact agreement with a numerical OLS oracle does not qualify statistical intervals.

W3 simultaneous-band falsification and leverage support (R71–R76)

Independent R71, R73 and R75 Gaussian source undercoverage comparisons on the same nominal 90% scale

The first new figure compares original separate source experiments (32 independent generating blocks per plotted condition) with a generating-law Gaussian benchmark. It is not a pooled estimator comparison or human-gaze result. Read the article.

R76 estimated HC3 simultaneous coverage and known Gaussian reference versus independent influential unit count

R76 analytic true slope-variance concentration and the lower tail of marginal HC3/true SE ratios

The R76 plots reproduce source-audited 2, 4, 8 and 16 separately independent ±4 predictor anchor conditions using 32 independently generated blocks per design and anchor count. Source cases and 999-draw conditional bootstrap maxima are not independent replication counts. R76 article · Full figure/count/source ledger · Original evidence and independent R76-A replay.

All plotted confidence-band methods remain unqualified for general nominal coverage and W3 inference blocker #289 is open.

R77 — prospectively frozen estimated functional covariance regularization

R77 independently audited 90% whole-grid truth-inclusion counts for original HC3 and fixed positive-definite shrinkage, with simulation-known Gaussian reference

R77 independently audited estimated marginal-SE lower-tail ratios and simultaneous Gaussian maximum critical values

The two additional scientific SVGs depict original new-source R77 computations independently reconstructed in R77-A: 256/256 accepted synthetic Gaussian source cases, 1,278,720 original 999-draw maximum-statistic values, zero refusals, and a true unit of independence of 32 generating blocks per condition. Strengths λ=.25/.50 and a seven-time-point smoothing target were frozen before these results. These figures do not establish general nominal-90% calibration or product qualification. Read the R77 research article · R77 science · R77-A independent audit.

R78 — independently audited temporal covariance robustness

R78 original source whole-band truth inclusion under temporal Gaussian AR(1) covariance

R77 to R78 separate-source, unpaired Gaussian temporal covariance robustness comparison

R78 source-specific marginal SE lower-tail and maximum critical diagnostics

These new scientific figures retain source-level n=32 independently generated primitive blocks per condition and separate the Gaussian time-independent R77 source experiment from the new Gaussian time-scaled AR(1) R78 stress. R78 original 12/12 science and R78-A independent 4/4 source-audit jobs verify 256/256 original source cases, 0 refusals and 1,278,720 original reference maxima. The generating covariance remains simulation-known only, no candidate is generally nominal-90%-calibrated, and gaze loss/non-Gaussian errors remain untested here. Read R78 article · Exact numeric plot ledger.

R79: nonseparable cross-coordinate Gaussian covariance

R79 nonseparable true Gaussian trial covariance law with time-varying cross-coordinate correlation

R79 independently verified complete 31-by-2 slope truth inclusion counts

R79 independently verified marginal SE lower-tail and maximum critical diagnostic

All three original scientific figures are grounded in the R79 12/12 original source workflow and the separate R79-A 4/4 mandatory independent source audit: 256/256 source cases, zero refusals, 1,278,720 original maximum statistics, and 32 independently generated primitive blocks per design/support/variance condition. Candidate λ=.25/.50 values remain frozen, not selected from observed source inclusion. Fully synthetic Gaussian data, no MNAR or general coverage qualification. Scientific article · Detailed count/source ledger.

R80: independent-unit Student-t5 heavy-tail Gaussian scale mixture

Original independent-unit Student-t5 whole-slope true function inclusion under frozen HC3 Gaussian and covariance-regularization references

R79 Gaussian and R80 heavy-tailed Student-t5 separate new primitive source comparison, not source-paired

R80 source mean HC3 estimated marginal SE lower-tail ratios and estimated Gaussian maximum criticals

The new R80 original SVGs preserve 32 independent primitive Gaussian-conditional Student-t5 source blocks per cell, 256/256 attempted and accepted factorial cases, and 1,278,720 original conditional maximum values verified by separately coded source replay. R80 original workflow #39487449656 12/12 science PASS; independent R80-A actual archive #39487811433 4/4 audit PASS. The source-known Student-t5 mixture benchmark is available only in simulation, not a Gaussian observed-data estimator. No general 90% calibration, no authentic gaze recordings, no MNAR claim. Read R80 article · Figure provenance.

R81: asymmetrically contaminated Student-t5 independent units

R81 complete 31×2 known-slope truth inclusion across five fixed references

R81 true centered Bernoulli unit-contamination time profile and added variance fraction

R81 estimated/true lower-tail HC3 slope SE ratios and estimated Gaussian simultaneous maximum criticals

The original R81 scientific run #39490888383 passed 12/12 original science jobs; separately coded R81-A original archive audit #39491187099 passed 4/4. Each of the 256/256 original new Student-t5 + centered skew Bernoulli X/Y source cases, zero refusals and all 1,278,720 conditional reference maxima were independently replayed. Source n=32 independent primitive generating blocks per fixed condition. Frozen λ=.25/.50 methods are not nominal-90%-qualified; true Bernoulli contamination parameters are simulator-only, no field recordings or MNAR. Full scientific article · Numerical figure/source ledger.

R82: complete/MCAR/MAR/MNAR observation-process falsification

R82 source-based observed sample fractions and mean 31×2 grid refusal

R82 analytic recorded-input MAR and hidden outcome MNAR loss probabilities

R82 source-wise available-case versus matched-complete slope differences, on estimable grid positions only

The original R82 science workflow #39571308151 passed 12/12 dedicated source jobs, and independent original-archive replay #39572315409 passed 4/4. Complete 256 original X/Y source conditions and all 1,024 paired MCAR/MAR/MNAR masks and grid diagnostics independently regenerated; 32 new independent source blocks per design/support/variance cell. Under primary two-anchor heteroskedastic curve MNAR, 83.1% observed samples and 33.56/62 refused grid positions coexist. This is not an MNAR correction or confidence band; public native missingness rejection is preserved, #289/#296 OPEN, version 1.2 HOLD. Full article · Evidence/figure ledger.

R83: nonidentified MNAR assumption weighting and simulator-only oracle

Five-delta observed-only assumed selection weights change pointwise slope estimates from the same mask

MNAR source observed sample fraction and independent signed-anchor grid refusal, unchanged across five assumptions

Inverse assumed-observation-probability maxima and effective participant-cluster count under five nonidentified delta choices

Original R83 source #39575847765 12/12 science PASS; independently coded R83-A true original replay #39576738539 4/4 PASS. Independently verified 256/256 original source X/Y, 1,024 actual paired masks, all 3,328 source-specific descriptive pointwise delta/oracle records and original SHA256 identities, 32 new independent primitive blocks per fixed cell. This is not identified MNAR, an observed-data oracle, or nominal-90% inference. Full study · Figure ledger.

R84: independent synthetic external ascertainment of otherwise missing outcomes

R84 original MAR and MNAR control fitted selection coefficients versus generator truth under external recovery

R84 25 versus 50 percent recovery mean absolute selection coefficient error in all eight source conditions

R84 independently recovered otherwise missing sample counts by unit design and MAR/MNAR source mechanism

Original R84 science #39581392688 12/12 dedicated jobs PASS, separately implemented R84-A original real archive #39582618020 4/4 PASS; independently reconstructed 256/256 complete original source conditions, 512 genuine MAR/MNAR masks, all 1,536 nested external recovery records, 32 new independent primitive blocks per fixed cell. The fitted δ is NULL at 0% recovery; newly ascertained outcomes permit only conditional model-dependent scalar δ estimation, not identification of arbitrary MNAR or general confidence bands. Stable public API unchanged, #289/#296 OPEN, v1.2/PyPI HOLD. R84 article · Source and figure ledger.

R85: biased validation of otherwise missing gaze values

R85 fitted original MNAR coefficient changes under five secondary recovery strategies

R85 eight source cells with latent selective external recovery, naïve versus simulator-only correct weights

R85 original MAR source falsely appears MNAR when secondary outcome-selective recovery is treated as random

Original R85 science #39629520741 12/12 dedicated PASS; independent R85-A true original replay #39630863879 4/4 PASS. Independently reconstructed 256 original X/Y source conditions, 512 first-stage MAR/MNAR masks and 2,560 recovered-data estimator strategies with 32 independent new primitive blocks per fixed cell. The naïve second-stage selection analysis is not an observed-data MNAR correction; exact latent propensity oracle is unavailable outside simulation. No public inference release or confidence bands. R85 article · Figures and numerical provenance.

R86: independently randomized audit of secondary validation failures

R86 source mean first-stage MAR and MNAR coefficients with no audit and synthetic 25 and 50 percent randomized audit

R86 source mean fitted second-stage gamma after newly randomized audit of otherwise unrecovered missing outcomes

R86 full eight-cell original MNAR mean absolute delta error without and with randomized failure audits

Original R86 source #39639148930 12/12 jobs PASS, independent R86-A genuine original replay #39640120223 4/4 PASS. Source-independent evidence covers 256 new complete X/Y source conditions, 512 paired MAR/MNAR masks, 4,608 third-stage audit/estimation records, with 32 new primitive independent source blocks per fixed cell. Random audit supplies genuinely new otherwise missing synthetic responses, not field recovery technology; source oracle unavailable to actual recordings, no confidence bands. R86 article · full evidence.

Reproducible provenance

These figures are version-controlled scientific assets in the research PRs, embedded without regenerating simulated results using a different source state. For source dataset counts, original workflow artifacts and SHA256 audit evidence, consult the scientific dashboard.

Figures for earlier E1–E4 workflows remain available through the existing experimental gallery. Other proposed B5–B10 or F1–F6 demonstrations that lack an original committed SVG are not represented here as if they were completed research figures.