Skip to contents

Part of the research-scale validation, advanced-model, interoperability, storage, adapter, or reproducibility programme. Experimental model functions remain subject to declared evidence gates.

Usage

dynamic_irtree_spec(source = c("samples", "visits", "fixations"),
  collapse_consecutive = TRUE, engine = c("baseline", "multinomial", "stan"),
  hidden_states = 0L, include_response = TRUE, include_person = FALSE,
  include_item = TRUE, condition_columns = character(),
  transition_predictors = character(), interactions = character(),
  include_time_gap = TRUE, person_effect = c("none", "fixed", "random"),
  item_effect = c("none", "fixed", "random"), structural_zeros = NULL,
  allowed_transitions = NULL, hidden_structural_zeros = NULL,
  hidden_allowed_transitions = NULL, missing_state = c("drop", "unknown",
  "marginalize"), uncertain_state_probability = NULL, misclassification_matrix = NULL,
  ridge = 1e-4, standardize = TRUE, reference_state = NULL, chains = 4L,
  parallel_chains = chains, iter_warmup = 1000L, iter_sampling = 1000L,
  adapt_delta = 0.95, max_treedepth = 12L)

Arguments

source

Sequence source for an `eye_dataset`.

collapse_consecutive

Collapse consecutive identical states.

engine

Estimation engine: auditable binary baseline, penalized

hidden_states

Number of latent states. Zero fits observed-state

include_response

Include item response as a predictor.

include_person

Include person effects.

include_item

Include item effects.

condition_columns

Condition-level predictors.

transition_predictors

Additional transition-level predictors.

interactions

Optional interaction terms supplied as formula strings.

include_time_gap

Include log time gap for irregular observations.

person_effect

Person effect type for Stan.

item_effect

Item effect type for Stan.

structural_zeros

Optional forbidden observed-state transition pairs.

allowed_transitions

Optional allowed observed-state transition pairs.

hidden_structural_zeros

Optional forbidden hidden-state pairs named `state1`, `state2`, and so forth.

hidden_allowed_transitions

Optional explicitly allowed hidden-state pairs.

missing_state

Treatment of missing observed states.

uncertain_state_probability

Optional column containing probability of

misclassification_matrix

Optional observed-state misclassification matrix.

ridge

Penalization for the multinomial baseline.

standardize

Standardize numeric design columns.

reference_state

Optional reference destination state.

chains

CmdStan controls.

parallel_chains

CmdStan controls.

iter_warmup

CmdStan controls.

iter_sampling

CmdStan controls.

adapt_delta

CmdStan sampler controls.

max_treedepth

CmdStan sampler controls.

Value

The documented eyeprocess object, data frame, plot, report path, or adapter result.